BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032D09SP1|AL429570
(874 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1475 1714 0.0
3x_Contig352 306 7e-83
>3x_Contig1475
Length = 10676
Score = 1714 bits (864), Expect = 0.0
Identities = 871/874 (99%)
Strand = Plus / Minus
Query: 1 atgccatttgtgttgctgtttctatgattccatcttcgttggttgtcgtcttgacgatca 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10011 atgccatttgtgttgctatttctatgattccatcttcgttggttgtcgtcttgacgatca 9952
Query: 61 ccatgtcagcaggtgctagagttatggctacgagaaatgttattgttcgtaaattggatt 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 9951 ccatgtcagcaggtgctaaagttatggctacgagaaatgttattgttcgtaaattggatt 9892
Query: 121 ctttggaagctttaggcgctgtcaacgatatctgttccgataagacaggtactttgacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9891 ctttggaagctttaggcgctgtcaacgatatctgttccgataagacaggtactttgacac 9832
Query: 181 aaggtaaaatgatcgctaaacaagtttggattccacaatttggtactattactgtccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9831 aaggtaaaatgatcgctaaacaagtttggattccacaatttggtactattactgtccaag 9772
Query: 241 aatccaatgagcctttcaatccaaccatcggcgaaattcatttaattcctaaattctcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9771 aatccaatgagcctttcaatccaaccatcggcgaaattcatttaattcctaaattctcac 9712
Query: 301 cataccaatataaacatgatgatgaagaagatgttggcattatcccagacttcaaatcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9711 cataccaatataaacatgatgatgaagaagatgttggcattatcccagacttcaaatcca 9652
Query: 361 agtatttggctggtgaattgggtccacttaatgtttctctatttgaccaatggctctaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9651 agtatttggctggtgaattgggtccacttaatgtttctctatttgaccaatggctctaca 9592
Query: 421 ctgctactttagctaacatcgccacagtgttccaagactctgaaactcaagattggaagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9591 ctgctactttagctaacatcgccacagtgttccaagactctgaaactcaagattggaagg 9532
Query: 481 cacacggtgaccctactgaaatcgctatccaagtctttgcaactagaatggacttaccta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9531 cacacggtgaccctactgaaatcgctatccaagtctttgcaactagaatggacttaccta 9472
Query: 541 gacatgttttaaccggtgaggacaaagatgatgaaaaggatgcccgtgctaacagctcct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9471 gacatgttttaaccggtgaggacaaagatgatgaaaaggatgcccgtgctaacagctcct 9412
Query: 601 ttgaacatgtggctgaattcccattcgattccagtgtgaagagaatgtctgccatctata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9411 ttgaacatgtggctgaattcccattcgattccagtgtgaagagaatgtctgccatctata 9352
Query: 661 agaataccgaggatccagcaaccccaatttatgaagtgttcaccaaaggtgcatttgaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9351 agaataccgaggatccagcaaccccaatttatgaagtgttcaccaaaggtgcatttgaaa 9292
Query: 721 gagtgttgcaatgttgtgactcctggtataccacacctgatggcaaaccatcgcctttga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9291 gagtgttgcaatgttgtgactcctggtataccacacctgatggcaaaccatcgcctttga 9232
Query: 781 gtwaggaagatttggaaaccattcaaaagaacgttgacaccctgtctagtgaagggttaa 840
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9231 gtaaggaagatttggaaaccattcaaaagaacgttgacaccctgtctagtgaagggttaa 9172
Query: 841 gagtgttagcctttgctaagaaaagttttaacga 874
||||||||||||||||||||||||||||||||||
Sbjct: 9171 gagtgttagcctttgctaagaaaagttttaacga 9138
>3x_Contig352
Length = 1459
Score = 306 bits (154), Expect = 7e-83
Identities = 472/578 (81%)
Strand = Plus / Minus
Query: 1 atgccatttgtgttgctgtttctatgattccatcttcgttggttgtcgtcttgacgatca 60
||||||||||||| || |||| ||||| ||||| || ||||| || || | || ||||
Sbjct: 1110 atgccatttgtgtcgcactttcaatgatcccatcgtcattggtcgttgttctaacaatca 1051
Query: 61 ccatgtcagcaggtgctagagttatggctacgagaaatgttattgttcgtaaattggatt 120
||||||| ||||| |||| ||| ||||| || ||| ||||||| |||||||||| ||||
Sbjct: 1050 ccatgtctgcaggcgctaaagtgatggcaactagacatgttatcattcgtaaattagatt 991
Query: 121 ctttggaagctttaggcgctgtcaacgatatctgttccgataagacaggtactttgacac 180
||||||| || ||||| || || ||||| || ||||| || |||||||||||||| || |
Sbjct: 990 ctttggaggcattaggtgccgttaacgacatttgttctgacaagacaggtactttaacgc 931
Query: 181 aaggtaaaatgatcgctaaacaagtttggattccacaatttggtactattactgtccaag 240
||||||||||||| || |||||||| |||||||| |||||||| ||||| | ||||||
Sbjct: 930 aaggtaaaatgattgccaaacaagtctggattccgcaatttggaactatcaatgtccaga 871
Query: 241 aatccaatgagcctttcaatccaaccatcggcgaaattcatttaattcctaaattctcac 300
| |||||||| ||||||||||| ||||| || |||||||| |||||||| ||||| || |
Sbjct: 870 attccaatgaacctttcaatcctaccataggtgaaattcagttaattcccaaattttctc 811
Query: 301 cataccaatataaacatgatgatgaagaagatgttggcattatcccagacttcaaatcca 360
|||| ||||| ||||||||||| || |||||||| || || || | || ||||||||||
Sbjct: 810 catatcaatacaaacatgatgacgaggaagatgtcggtatgataacggatttcaaatcca 751
Query: 361 agtatttggctggtgaattgggtccacttaatgtttctctatttgaccaatggctctaca 420
|||||| |||| |||||||||||| || |||||||| |||| |||||| | ||||
Sbjct: 750 agtattatgctgatgaattgggtccgctaaatgtttcattattcactcaatggttataca 691
Query: 421 ctgctactttagctaacatcgccacagtgttccaagactctgaaactcaagattggaagg 480
| ||||| || ||||| ||||| || ||||||| || | ||||||||||||||||| |
Sbjct: 690 ccgctacattggctaatatcgctactgtgttccgggatcccgaaactcaagattggaaag 631
Query: 481 cacacggtgaccctactgaaatcgctatccaagtctttgcaactagaatggacttaccta 540
| || |||||||| || ||||||||||| ||||| || || ||||||||||| ||||||
Sbjct: 630 ctcatggtgacccaacagaaatcgctattcaagtgttcgcgactagaatggatctaccta 571
Query: 541 gacatgttttaaccggtgaggacaaagatgatgaaaag 578
| | || |||| ||||| ||||| ||||||||||||
Sbjct: 570 ggcgcgtactaactggtgaagacaacgatgatgaaaag 533
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6597
Number of Sequences: 1807
Number of extensions: 6597
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 2
length of query: 874
length of database: 10,358,551
effective HSP length: 16
effective length of query: 858
effective length of database: 10,329,639
effective search space: 8862830262
effective search space used: 8862830262
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)